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CAZyme Gene Cluster: MGYG000000238_4|CGC3
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000000238_01214 | hypothetical protein |
TC | 195064 | 197769 | + | 9.B.74.1.1 |
| MGYG000000238_01215 | hypothetical protein |
TC | 197966 | 199810 | + | 2.A.3.14.3 |
| MGYG000000238_01216 | hypothetical protein |
TF | 199912 | 200802 | - | HTH_5 |
| MGYG000000238_01217 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1 |
CAZyme | 201002 | 202501 | + | GH51 |
| MGYG000000238_01218 | sn-glycerol-3-phosphate-binding periplasmic protein UgpB |
TC | 202518 | 203792 | + | 3.A.1.1.44 |
| MGYG000000238_01219 | Lactose transport system permease protein LacF |
TC | 203912 | 204811 | + | 3.A.1.1.36 |
| MGYG000000238_01220 | L-arabinose transport system permease protein AraQ |
TC | 204822 | 205685 | + | 3.A.1.1.34 |
| MGYG000000238_01221 | hypothetical protein |
null | 205696 | 206265 | + | DUF624 |
| MGYG000000238_01222 | Intracellular exo-alpha-(1->5)-L-arabinofuranosidase 1 |
CAZyme | 206262 | 207782 | + | GH51 |
| MGYG000000238_01223 | Extracellular exo-alpha-(1->5)-L-arabinofuranosidase |
CAZyme | 207792 | 208745 | + | GH43_26| GH43 |
| MGYG000000238_01224 | Intracellular exo-alpha-L-arabinofuranosidase 2 |
CAZyme | 208766 | 210208 | + | GH51 |
| MGYG000000238_01225 | hypothetical protein |
null | 210234 | 210464 | + | DUF6171 |
| MGYG000000238_01226 | hypothetical protein |
CAZyme | 210703 | 213534 | + | CBM32| GH85 |
| MGYG000000238_01227 | Carnitine transport permease protein OpuCD |
TC | 213666 | 214328 | - | 3.A.1.12.4 |
| MGYG000000238_01228 | Glycine betaine/carnitine/choline-binding protein OpuCC |
TC | 214333 | 215253 | - | 3.A.1.12.4 |
| MGYG000000238_01229 | Carnitine transport permease protein OpuCB |
TC | 215253 | 215888 | - | 3.A.1.12.4 |
| MGYG000000238_01230 | Carnitine transport ATP-binding protein OpuCA |
TC | 215892 | 217067 | - | 3.A.1.12.4 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is arabinan
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000000238_01217 | GH51_e0|3.2.1.55 | arabinan |
| MGYG000000238_01222 | ||
| MGYG000000238_01223 | GH43_e14 | |
| MGYG000000238_01224 | GH51_e14|3.2.1.55 | arabinan |
| MGYG000000238_01226 | GH85_e0|CBM32_e114|3.2.1.96|3.2.1.113|3.2.1.- | hostglycan |
Substrate predicted by dbCAN-PUL is arabinan download this fig
